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Table 1 Sequences of oligonucleotide primers and details of polymerase chain reactions

From: Chi-Ju-Di-Huang-Wan protects rats against retinal ischemia by downregulating matrix metalloproteinase-9 and inhibiting p38 mitogen-activated protein kinase

mRNA

Primers (5′→3′)

Bases in base pairs

Product size

Cycles profile

Cycles number

Denaturation/annealing/extension (temperature and time in seconds)

β-actin

F: AGGGAAATCGTGCGTGACAT

694–713

150

95/95/60 °C

(20/3/30 s)

40

R: GAACCGCTCATTGCCGATAG

824–843

Thy-1

F: ACCAAGGATGAGGGCGACTA

380–399

120

95/95/60 °C

(20/3/30 s)

40

R: CAGGCTTATGCCACCACACTT

479–499

MMP-9

F: TGCGCTGGGCTTAGATCATT

1218–1237

105

95/95/60 °C

(20/3/30)

40

R: TGGATGCCTTTTATGTCGTCTTC

1300–1322

  1. F forward; R reverse