Table 2 List of the genes in the cp genomes of six species of Pulsatilla

Photosynthesis

Subunits of ATP synthase (6)

atpA, atpB, atpE, atpF^a, atpH, atpI

Subunits of NADH dehydrogenase (12)

ndhA^a, ndhB^a (x2), ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK

Subunits of cytochrome (6)

petA, petB^a, petD^a, petG, petL, petN

Subunits of photosystem I (5)

psaA, psaB, psaC, psaI, psaJ

Subunits of photosystem II (15)

psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ

Other genes

Subunit of rubisco (1)

rbcL

Subunit of Acetyl-CoA-carboxylase (1)

accD

c-type cytochrome synthesis gene (1)

ccsA

Envelop membrane protein (1)

cemA

Protease (1)

clpP^b

Maturase (1)

matK

Self-replication

Large subunit of ribosome (13)

rpl2^a (x2), rpl14 (x2), rpl16^a (x2), rpl20, rpl22 (x2), rpl23 (x2) rpl33, rpl36

DNA dependent RNA polymerase (4)

rpoA, rpoB, rpoC1^a, rpoC2

Small subunit of ribosome (18)

rps2, rps3 (x2), rps4, rps7 (x2), rps8 (x2), rps11, rps12^a (x3), rps14, rps15, rps16^a, rps18, rps19 (x2)

rRNA Genes (8)

rrn4.5 (x2), rrn5 (x2), rrn16 (x2), rrn23 (x2)

tRNA Genes (36)

trnA-UGC (x2), trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnG-GCC, trnG-UCC, trnH-GUG, trnI-CAU (x2), trnI-GAU (x2), trnK-UUU, trnL-CAA (x2), trnL-UAA, trnL-UAG, trnfM-CAU, trnM-CAU, trnN-GUU (x2), trnP-UGG, trnQ-UUG, trnR-ACG (x2), trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnV-GAC (x2), trnV-UAC, trnW-CCA, trnY-GUA

Unknown function

Conserved open reading frames (5)

ycf 1, ycf 2 (x2), ycf 3^b, ycf4