Table 2 Genes in the chloroplast genome of R. laevigata, R. rugosa and R. canina
From: The chloroplasts genomic analyses of Rosa laevigata, R. rugosa and R. canina
Category | Group of genes | Name of genes |
|---|---|---|
Self-replication | Large subunit of ribosomal proteins | rpl2*,a, 14, 16*, 20, 22, 23a, 33, 36 |
Small subunit of ribosomal proteins | rps2, 3, 4, 7a, 8, 11, 12*,a, 14, 16*, 18, 19 | |
DNA-dependent RNA polymerase | rpoA, B, C1*, C2 | |
rRNA genes | rrn16Sa, rrn23Sa, rrn4.5Sa, rrn5Sa | |
tRNA genes | trnA-UGC*,a, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-UCC*, trnG-GCC, trnH-GUG, trnI-CAU, trnI-GAU*,a, trnK-UUU*, trnL-CAA, trnL-UAA*, trnL-UAG, trnM-CAU, trnN-GUU, trnP-UGG, trnQ-UUG, trnR-ACG, trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC, trnV-UAC*, trnW-CCA, trnY-GUA | |
Photosynthesis | Photosystem I | psaA, B, C, I, J |
Photosystem II | psbA, B, C, D, E, F, H, I, J, K, L, M, N, T, Z, | |
NADH oxidoreductase | ndhA*, B*,a, C, D, E, F, G, H, I, J, K | |
Cytochrome b6/f complex | petA, B*, D*, G, L, N | |
ATP synthase | atpA, B, E, F*, H, I | |
Rubisco | rbcL | |
Other genes | Maturase | matK |
Protease | clpP* | |
Envelope membrane protein | cemA | |
Subunit acetyl-CoA-carboxylase | accD | |
c-Type cytochrome synthesis gene | ccsA | |
Conserved open-reading frames | ycf1, 2a, 3*, 4, 15 |