Table 4 Codon content of 20 amino acids and stop codons in H.odorata
From: Comparative and phylogenetic analyses of eleven complete chloroplast genomes of Dipterocarpoideae
H. odorata | |||||||
|---|---|---|---|---|---|---|---|
AA | Codons | Numbers | RSCU | AA | Codons | Numbers | RSCU |
Phe | UUU | 1187 | 1.25 | Ser | UCU | 787 | 1.63 |
UUC | 707 | 0.75 | UCC | 486 | 1.01 | ||
Leu | UUA | 763 | 1.61 | UCA | 545 | 1.13 | |
UUG | 606 | 1.28 | UCG | 307 | 0.64 | ||
CUU | 635 | 1.34 | Pro | CCU | 445 | 1.32 | |
CUC | 255 | 0.54 | CCC | 302 | 0.9 | ||
CUA | 365 | 0.77 | CCA | 377 | 1.12 | ||
CUG | 226 | 0.48 | CCG | 225 | 0.67 | ||
Ile | AUU | 1126 | 1.44 | Thr | ACU | 510 | 1.33 |
AUC | 618 | 0.79 | ACC | 348 | 0.91 | ||
AUA | 605 | 0.77 | ACA | 441 | 1.15 | ||
Met | AUG | 593 | 1 | ACG | 236 | 0.61 | |
Val | GUU | 571 | 1.44 | Ala | GCU | 606 | 1.61 |
GUC | 235 | 0.59 | GCC | 264 | 0.7 | ||
GUA | 520 | 1.31 | GCA | 390 | 1.04 | ||
GUG | 259 | 0.65 | GCG | 246 | 0.65 | ||
Tyr | UAU | 879 | 1.44 | Cys | UGU | 329 | 1.17 |
UAC | 338 | 0.56 | UGC | 233 | 0.83 | ||
TER | UAA | 292 | 0.94 | TER | UGA | 410 | 1.32 |
UAG | 228 | 0.74 | Trp | UGG | 550 | 1 | |
His | CAU | 567 | 1.46 | Arg | CGU | 365 | 0.97 |
CAC | 211 | 0.54 | CGC | 180 | 0.48 | ||
Gln | CAA | 772 | 1.47 | CGA | 472 | 1.26 | |
CAG | 281 | 0.53 | CGG | 208 | 0.55 | ||
Asn | AAU | 1006 | 1.42 | Ser | AGU | 481 | 1 |
AAC | 410 | 0.58 | AGC | 286 | 0.59 | ||
Lys | AAA | 1081 | 1.4 | Arg | AGA | 686 | 1.83 |
AAG | 458 | 0.6 | AGG | 339 | 0.9 | ||
Asp | GAU | 875 | 1.53 | Gly | GGU | 603 | 1.13 |
GAC | 267 | 0.47 | GGC | 270 | 0.51 | ||
Glu | GAA | 1086 | 1.39 | GGA | 802 | 1.5 | |
GAG | 480 | 0.61 | GGG | 458 | 0.86 | ||