|
No
|
Markers
|
Aligned length
|
Polymorphic sites
|
Parsimony informative sites (PICs)
|
Mean K2P distance
|
Discrimination rates by tree-based method
|
|---|
|
Numbers
|
%
|
Numbers
|
%
|
|---|
| |
Complete cp genomes
|
136,352
|
4664
|
3.42%
|
2175
|
1.60%
|
0.00824
|
100%
|
| |
Specific barcodes
|
|
1
|
trnH(GUG)-psbA
|
506
|
65
|
12.85%
|
30
|
5.93%
|
0.03880
|
100%
|
|
2
|
trnE(UUC)-trnT(GGU)
|
1155
|
118
|
10.22%
|
58
|
5.02%
|
0.02759
|
35.29%
|
|
3
|
psbZ-trnG(GCC)
|
1189
|
138
|
11.61%
|
55
|
4.63%
|
0.03028
|
64.71%
|
|
4
|
trnF(GAA)-ndhJ
|
977
|
157
|
16.07%
|
108
|
11.05%
|
0.04316
|
70.59%
|
|
5
|
petA-psbL
|
1580
|
129
|
8.16%
|
69
|
4.37%
|
0.03071
|
64.71%
|
|
6
|
ccsA-ndhD
|
300
|
46
|
15.33%
|
24
|
8.00%
|
0.04475
|
41.18%
|
|
7
|
ndhF-trnL(UAG)
|
1923
|
222
|
11.54%
|
93
|
4.84%
|
0.03428
|
47.06%
|
| |
Combination (1–2-3)
|
2850
|
321
|
11.26%
|
143
|
5.02%
|
0.03034
|
100%
|
| |
Universal barcodes
|
|
1
|
psbK-psbI
|
424
|
25
|
5.90%
|
17
|
4.01%
|
0.02121
|
41.18%
|
|
2
|
atpF-atpH
|
625
|
46
|
7.36%
|
15
|
2.40%
|
0.01793
|
47.06%
|
| |
Combination (1–2)
|
1049
|
71
|
6.77%
|
32
|
3.05%
|
0.01929
|
47.06%
|
- Discrimination rates (%) = [the number of species with bootstrap values more than 50% / the total number of species] × 100%
