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Fig. 4 | Chinese Medicine

Fig. 4

From: Comparison of ONT and CCS sequencing technologies on the polyploid genome of a medicinal plant showed that high error rate of ONT reads are not suitable for self-correction

Fig. 4

Distributions of discordance rate of ONT and NGS reads. The discordance between ONT-raw reads and ONT-nextdenovo assembly was calculated in 100 bp bins, bins with UCR length > 90% were regarded as high UCR. Both distributions of mismatch and gaps sequencing error in high UCR are higher than that of the whole genome. The blue cumulative line represents the cumulative distribution of NGS reads with mismatch rate, 92.2% of mapped NGS reads have a mismatch rate of ≤ 2%, and the average genome-wide mismatch rate is 0.68%

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